LOCUS       AY095303S1              2375 bp    DNA     linear   PLN 21-JAN-2003
DEFINITION  Chlamydomonas reinhardtii c-type cytochrome synthesis 1 (CCS1)
            gene, ccs1-ac206 allele, 5'UTR and exons 1 through 6.
ACCESSION   AY095303
VERSION     AY095303.1  GI:25986619
KEYWORDS    .
SEGMENT     1 of 2
SOURCE      Chlamydomonas reinhardtii
  ORGANISM  Chlamydomonas reinhardtii
            Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Volvocales;
            Chlamydomonadaceae; Chlamydomonas.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Dreyfuss,B.W., Hamel,P.P., Nakamoto,S.S. and Merchant,S.
  TITLE     Functional Analysis of a Divergent System II Protein, Ccs1,
            Involved in c-Type Cytochrome Biogenesis
  JOURNAL   J. Biol. Chem. 278 (4), 2604-2613 (2003)
   PUBMED   12427747
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Dreyfuss,B.W., Hamel,P., Nakamoto,S.S. and Merchant,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2002) Department of Chemistry & Biochemistry,
            University of California, Los Angeles, P.O. Box 951569, 405 Hilgard
            Avenue, Los Angeles, CA 90095-1569, USA
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Chlamydomonas reinhardtii"
                     /mol_type="genomic DNA"
                     /strain="ccs1-ac206"
                     /db_xref="taxon:3055"
     gene            order(124..2375,AY095304.1:1..1465)
                     /gene="CCS1"
                     /allele="ccs1-ac206"
     mRNA            join(124..330,512..825,1045..1233,1418..1798,2000..2131,
                     2253..2345,AY095304.1:6..303,AY095304.1:495..677,
                     AY095304.1:863..1465)
                     /gene="CCS1"
                     /product="c-type cytochrome synthesis 1"
     exon            124..330
                     /gene="CCS1"
                     /number=1
     5'UTR           124..206
                     /gene="CCS1"
     CDS             join(207..330,512..825,1045..1233,1418..1798,2000..2131,
                     2253..2345,AY095304.1:6..303,AY095304.1:495..677,
                     AY095304.1:863..1098)
                     /gene="CCS1"
                     /codon_start=1
                     /product="c-type cytochrome synthesis 1"
                     /protein_id="AAM44130.1"
                     /db_xref="GI:25986621"
                     /translation="MQPYASVSGRCLSRPDALHVIPFGRPLQAIAGRRFVRCFAKGGQ
                     PGDKKKLNVTDKLRLGNTPPTLDVLKAPRPTDAPSAIDDAPSTSGLGLGGGVASPRTL
                     VQSNAVQVAWRRLMKELSSLPRAIAIMALIAVLSGLGTFIPQNKSIEYYLVNYPDGAE
                     KVLGFLTGDLILTLQLDHIYTADYFYLSMGLLAASLAACTYTRQWPAVKVAQRWRFLT
                     QPKSLLKQGRTEVLPNARVSDLGAILLQRGYQVRESCACQRTAAALLLRFHSVAADPS
                     PLLSFVLVAQVFVKDGSLYGFKGLAGKLGPIGVHAALLLCLFGTAWSGFGTLKGNVMC
                     PEGQDFQVASFLQPSSPIASMPASASNVIHVNKFTIDYRPDGSVAQFYSDLSLLDPAQ
                     GGKEMMRKTISVNDPFRFNGVTMYQTDWSLSAVTLRVLGQDAPLARAAQAAEAQAAAS
                     TSGPTSSASSTSDALPQQRTAFNLPMASLEGKPGVAGRLWATFLPLAEPGQDGSAPKG
                     ISILARDPQSVVFYDAKGQFVGVRRPGSGKPIEVEGLALVVEDVTGATGLELKSDPGV
                     PAVYAGFGGLMVTTLISYLSHSQVWALQQGSSLFVSGRTNRAKLAFDRELDDILNAVP
                     ELPPTAATTVASSASTAAPAPTAKQ"
     exon            512..825
                     /gene="CCS1"
                     /number=2
     exon            1045..1233
                     /gene="CCS1"
                     /number=3
     exon            1418..1798
                     /gene="CCS1"
                     /number=4
     variation       1648
                     /gene="CCS1"
                     /note="results in readthrough of typical intron 4 and
                     addition of 36 amino acids within stromal loop"
                     /replace="g"
     exon            2000..2131
                     /gene="CCS1"
                     /number=5
     exon            2253..2345
                     /gene="CCS1"
                     /number=6
BASE COUNT      474 a    718 c    697 g    486 t
ORIGIN      
        1 cacatacgac cccaagcagg gccctgcgtg ggtgaaatgc cacacgcggc acgaatccgt
       61 cggccactcc atgaattgcc cacaaggcca caattgagcc tacaaggatg tggaagtgat
      121 aactacctag ctccactacc agctgcgact gcccagttct cgagctttct ttctgtccgg
      181 ccccgcgctt gcacgcgtgc acaaaaatgc agccatacgc ttccgtgagc gggcgatgtc
      241 tatctagacc agatgcattg catgtgatac cgtttgggcg accgctgcaa gcaattgccg
      301 ggcggcggtt cgttcgctgt tttgcgaaag gtgcgcagcc ggggaaagaa cacacgaatg
      361 ggtgtgcagg caattgatgg tttcactatc aattaattat cagggctggg ttgtacgcac
      421 ttggcagtgg acttgcatgc gtggaagcga tgtcgccacg ctgctattca aatattaagt
      481 tggagcctgc tctgctggac ccaaaacata ggaggacaac ctggtgacaa gaagaagctc
      541 aacgtgacgg acaagctgcg cctcgggaac actcctccca cgctggacgt gcttaaagcg
      601 ccacggccaa ccgacgctcc ctcagccatc gatgacgccc ccagcacttc gggcctgggg
      661 ctgggcggag gagtggcgag ccccaggact ttggtgcagt ccaatgccgt gcaggtggcg
      721 tggcgccggc tcatgaagga gctgtcgtcg ctcccacgcg ccatcgccat catggccctc
      781 atcgccgtgc tgtcgggcct gggcaccttc atcccccaaa acaaggtgcg ggggaatgcg
      841 acacatgaag ttaatgcaat tctgccaacc aagctgaagc acttgcattg gagccgcgcg
      901 ggatgagcca gcacaccagc tttgacctgc gcgtaccgca accaggcacc tacgccctcc
      961 cgcgcagtgc ctccctttcg gtctctccga ctcttccaac ctgtctgacc ctcatctcca
     1021 ccccccaatg tatccatcca acagtccatc gagtactacc tggtcaacta cccagacggc
     1081 gcggagaagg tgctggggtt cctgactggc gacctcattc tgaccctaca gctggaccac
     1141 atctacaccg ctgactattt ctacctgtcc atggggctgc tggccgcctc cctggctgcc
     1201 tgcacctaca cccgccagtg gcccgccgta aaggtgcgtg cgtaaagggt ttgggagtcg
     1261 taggaggaag gcagggtaga tggcgggaag gggcggacag agaggaagga ttggggcgta
     1321 ggttgtggtg acggagaagg cccggttgga gcctgcacgg gggttaggta aaggtgaaag
     1381 gcaggcaaat accgcccact cgtcgtgttc ctgacaggtg gctcagcgct ggcgcttcct
     1441 gacgcagccg aagtcgctgc ttaagcaggg gcgcacggag gtgttgccca acgcgcgtgt
     1501 gtccgacctg ggcgctatcc tgctgcagcg gggctaccag gtgagggaga gctgtgcgtg
     1561 tcagcgtacg gctgctgcat tacttcttag gtttcactcc gtcgctgctg acccttcacc
     1621 tctgctttcc tttgttcttg tggctcaagt gtttgtgaag gacggctcct tatacggctt
     1681 caagggcctg gccggcaaac tggggcccat cggcgtgcac gcggcgctgc tgctgtgcct
     1741 gttcggtacg gcgtggagcg ggttcggcac cctcaagggc aacgtcatgt gcccggaggt
     1801 gagggagcag aggacgcaca tggttgtctg gtggcggcac ggagacacgg tagtgacaag
     1861 ccggctcagg gcagtttggg aaggtggtga tgcaagttgc tggccaggga agtacgctca
     1921 cccatgttct ccgagtgctt gctatgttcc aacacgatcc cagaaatcgc acgaggacca
     1981 atcaacgttg cgcctgcagg gtcaagactt ccaggtggct tccttcctgc agccgtcctc
     2041 gccaattgcc agcatgcccg cctccgcctc caacgtcatc cacgtcaaca agttcaccat
     2101 tgactaccgc ccagatggct cagtggcgca ggtgcgtgcg ctacaggttg gccggaacca
     2161 tgccacactt tgcaccctca ccattcctgc gatagtgttg gttctcatca gtactgacgt
     2221 attcatctcc ctccatctgc cctatcccgc agttctactc ggacttgtcg ctgcttgatc
     2281 ccgcccaggg cggcaaggaa atgatgcgca agaccatcag cgtgaacgac cccttccgct
     2341 tcaacgtgag aatacaacgc atgacggtac ctgct
//

