Index of /~palais/pcr/Ian/Ian's Bioinformatics Package/BioPerl/bioperl-1.5.0/t/data

	Name	Last modified	Size
	Parent Directory		-
	5X_1895.FASTXY	2002-01-08 19:09	76K
	503384.MEGABLAST.0	2003-01-17 13:22	1.0K
	503384.MEGABLAST.2	2003-01-17 13:22	34K
	AAC12660.fa	2001-04-30 10:12	571
	AB077698.gb	2002-05-09 15:37	7.4K
	AE003528_ecoli.bls	2001-07-27 16:06	8.1K
	AE003644_Adh-genomic.gb	2003-07-17 19:35	360K
	AF032047.gbk	2003-08-27 14:30	2.5K
	AF165282.gb	2001-04-30 10:12	3.1K
	AHCYL1.kegg	2003-10-20 20:43	3.7K
	ATF14F8.gbk	2003-07-16 20:13	179K
	AY095303S1.gbk	2003-08-27 13:59	7.1K
	AnnIX-v003.gbk	2003-07-17 20:42	24K
	BK000016-tpa.gbk	2003-06-28 18:23	4.0K
	BLOSUM50	2003-08-08 15:23	2.1K
	BN000066-tpa.embl	2003-06-28 18:23	15K
	Bird_Ovomucoids.nex	2004-10-26 21:47	15K
	D10483.gbk	2003-02-20 15:09	251K
	D12555.gbk	2003-08-11 14:45	1.9K
	ECAPAH02.embl	2002-11-09 08:08	244K
	GO.defs.test	2002-11-14 16:48	1.6K
	GO.defs.test2	2002-11-18 12:30	966
	Genscan.FastA	2002-06-20 03:47	1.1K
	HUMBETGLOA.FASTA	2001-12-08 09:59	144K
	HUMBETGLOA.fa	2002-03-11 20:39	3.1K
	HUMBETGLOA.gff	2001-04-30 10:12	387
	HUMBETGLOA.grail	2001-06-14 14:15	5.0K
	HUMBETGLOA.grailexp	2001-06-14 14:15	2.1K
	HUMBETGLOA.mzef	2001-04-30 10:12	441
	HUMBETGLOA.tblastx	2001-06-14 13:32	11K
	Kingdoms_DNA.nex	2004-10-26 21:47	101K
	L77119.hmmer	2001-10-09 20:30	2.5K
	LL-sample.seq	2002-11-07 15:25	8.1K
	LOAD_Ccd1.dnd	2001-11-01 09:34	885
	LittleChrY.dbsnp.xml	2002-06-19 23:09	48K
	Mcjanrna_rdbII.gbk	2004-08-04 20:18	3.0K
	MmCT	2003-09-05 06:20	3.9K
	NC_001284.gbk	2004-08-29 04:27	599K
	NM_002253.tseq	2004-01-27 18:50	6.2K
	NM_002254.gb	2003-05-18 20:55	10K
	NT_021877.gbk	2003-12-06 10:21	16K
	P33897	2004-07-02 20:01	29K
	PAM250	2003-08-08 15:23	2.1K
	Primate_mtDNA.nex	2004-10-26 21:47	31K
	SPAN_Family4nl.nex	2004-10-26 21:47	31K
	SPAN_Family7n.nex	2004-10-26 21:47	111K
	SPAN_Family8a.nex	2004-10-26 21:47	10K
	SwissProt.dat	2002-01-17 16:03	2.1K
	T7.aln	2004-02-19 14:46	21K
	Treebase-chlamy-dna.nex	2004-10-26 21:47	15K
	U58726.gb	2002-09-30 19:29	55K
	U83300.bsml	2004-10-08 12:44	4.3K
	UnaSmithHIV-both.nex	2004-10-26 21:47	95K
	X98338_Adh-mRNA.gb	2003-07-17 19:36	5.7K
	a_thaliana.blastn	2002-02-05 10:46	16K
	aaml.mlc	2002-07-27 15:45	3.6K
	aaml_pairwise.mlc	2003-07-07 11:40	3.2K
	acefile.ace.1	2001-11-08 15:59	341K
	acefile.singlets	2001-11-08 15:59	67K
	adh.mb_tree.nexus	2004-06-24 10:11	17K
	alnfile.fasta	2001-04-30 10:12	303
	amino.fa	2004-11-01 14:09	456
	ar.embl	2001-04-30 10:12	7.6K
	atp1.matrix	2004-10-20 00:25	81K
	barns-combined.nex	2004-11-01 14:10	64K
	baseml.pairwise	2004-11-05 11:49	960
	baseml.usertree	2004-11-05 12:07	1.2K
	basic-bush.nex	2004-10-26 21:47	472
	basic-ladder.nex	2004-10-26 21:47	462
	biodbgff/	2005-11-10 15:09	-
	biographics/	2005-11-10 15:09	-
	bl2seq.blastn	2003-01-25 08:32	1.5K
	bl2seq.blastn.rev	2003-01-25 08:32	1.3K
	bl2seq.blastx.out	2003-04-27 11:15	2.9K
	bl2seq.bug940.out	2001-06-04 12:59	6.3K
	bl2seq.out	2001-04-30 10:12	2.2K
	bl2seq.tblastx.out	2003-04-27 11:15	14K
	blast.report	2002-03-10 10:27	22K
	blat.psLayout3	2003-09-18 04:19	644
	blosum62.bla	2004-03-16 12:28	2.1K
	brassica_ATH.WUBLASTN	2004-08-31 23:03	8.9K
	c200-vs-yeast.BLASTN	2003-08-12 13:09	21K
	c200-vs-yeast.BLASTN.m8	2003-08-12 13:09	740
	calm.swiss	2004-07-31 10:09	13K
	cds-266.fas	2003-12-27 09:58	15K
	chad100.scf	2001-09-27 17:16	79K
	char-interleave.nex	2004-10-26 21:47	581
	char-matrix-spaces.nex	2004-10-26 21:47	520
	codeml.mlc	2002-07-27 15:45	13K
	codeml_nssites.mlc	2003-07-08 20:40	22K
	compLD_missingtest.prettybase	2003-11-10 19:14	897
	compLD_test.prettybase	2003-08-15 14:40	331
	component.ontology.test	2002-11-14 16:48	2.6K
	component.ontology.test2	2002-11-18 12:30	453
	consed_project/	2005-11-10 15:09	-
	crab.dat.cn	2003-12-11 15:51	1.0K
	crab.nj	2003-12-11 15:51	949
	crab.njb	2003-12-11 15:51	1.2K
	crypto.sim4-0	2003-05-10 13:41	123
	crypto.sim4-3	2003-05-10 13:41	958
	crypto.sim4-4	2003-05-10 13:41	1.2K
	cys1_dicdi.water	2002-02-13 08:20	6.0K
	cysprot.fa	2004-11-01 14:10	2.5K
	cysprot.msf	2001-04-30 10:12	4.5K
	cysprot.needle	2001-12-18 13:04	2.2K
	cysprot.tblastn	2001-04-30 10:12	23K
	cysprot.water	2001-12-18 13:04	2.2K
	cysprot1.FASTA	2001-12-08 09:59	14K
	cysprot1.fa	2004-11-01 14:10	366
	cysprot1a.fa	2004-11-01 14:10	1.1K
	cysprot1a.msf	2001-04-30 10:12	1.9K
	cysprot1b.fa	2004-11-01 14:10	1.4K
	cysprot1b.hmmsearch	2002-09-20 11:07	8.6K
	cysprot1b.msf	2001-04-30 10:12	2.5K
	cysprot1b.newick	2001-11-23 16:18	98
	cysprot_vs_gadfly.FASTA	2002-05-21 16:02	43K
	dbfa/	2005-11-10 15:09	-
	directives.gff3	2005-01-18 01:56	127
	dmel_2Lchunk.gb	2003-12-12 13:39	29K
	dna1.fa	2001-04-30 10:12	224
	dna2.fa	2001-04-30 10:12	590
	dnaE-bsub-prot.fa	2002-04-20 17:24	660
	dnaE-bsub.fa	2002-04-20 13:40	2.1K
	dnaEbsub_ecoli.wublastx	2002-04-20 13:40	6.1K
	dnaEbsub_ecoli.wutblastn	2002-04-20 17:24	4.4K
	dnaEbsub_ecoli.wutblastx	2002-04-20 17:24	8.5K
	ecoli-trna-qrna.out	2003-07-25 11:21	26K
	ecoli_domains.rps.xml	2001-10-21 21:57	34K
	ecoli_domains.rpsblast	2003-02-10 14:52	5.9K
	ecolitst.bls	2001-12-06 14:52	11K
	ecolitst.fa	2001-04-30 10:12	944
	ecolitst.noseqs.wublastp	2004-06-03 13:26	3.2K
	ecolitst.wublastp	2002-01-16 09:14	13K
	empty.bl2seq	2001-11-15 08:20	676
	example.hap	2004-05-10 16:49	16K
	example.phase	2004-05-10 16:49	123
	expected.blast.out	2001-04-30 10:12	1.8K
	factor7.embl	2001-04-30 10:12	21K
	footprinter.out	2002-11-07 11:28	14K
	geneid_1.0.out	2003-05-19 08:32	1.8K
	genemark.out	2001-04-30 10:12	6.8K
	genewise.out	2002-09-23 07:18	16K
	genewise_output.paracel_btk	2003-02-19 20:14	5.3K
	genomewise.out	2002-11-24 07:57	350
	genomic-seq.epcr	2001-07-27 10:21	553
	genomic-seq.fasta	2001-04-30 10:12	170K
	genomic-seq.genscan	2001-04-30 10:12	13K
	genomic-seq.mzef	2001-04-30 10:12	1.8K
	gf-s71.needle	2002-06-21 15:09	2.8K
	glimmer.out	2003-05-23 16:02	1.2K
	hemoglobinA.meg	2002-01-26 08:50	1.4K
	hg16_chroms.gff	2003-11-07 17:42	1.6K
	hmmpfam.out	2001-04-30 10:12	2.0K
	hmmsearch.out	2001-04-30 10:12	151K
	hs_est.est2genome	2002-10-11 09:13	1.0K
	hs_fugu.newick	2002-03-20 21:08	59
	hs_owlmonkey.aln	2004-01-04 20:00	839
	hs_owlmonkey.fas	2003-07-27 14:48	397
	hs_owlmonkey.fasta	2002-05-27 21:39	424
	hsinsulin.blastcl3.blastn	2003-07-31 20:54	19K
	humor.maf	2004-12-14 17:58	33K
	humts1.pal	2003-09-30 21:26	2.1K
	hybrid1.gff3	2005-01-18 01:56	544
	hybrid2.gff3	2005-01-18 01:56	535
	insulin.water	2002-05-27 21:39	1.5K
	interpro_short.xml	2003-02-07 16:46	33K
	intrablock-comment.nex	2004-10-26 21:47	576
	knownGene.gff3	2005-01-18 11:58	1.3K
	little.largemultifasta	2004-01-30 11:18	1.1K
	long-names.nex	2004-10-26 21:47	641
	lucy.info	2001-10-02 14:17	66
	lucy.qual	2001-10-02 14:17	2.7K
	lucy.seq	2001-10-02 14:17	1.1K
	lucy.stderr	2001-10-02 14:17	66
	lysozyme6.protml	2002-07-24 23:34	8.8K
	lysozyme6.simple.protml	2002-07-24 23:34	302
	mapmaker.out	2001-11-28 16:36	1.5K
	mast.dat	2003-10-14 13:08	167K
	megablast_output.paracel_btk	2003-02-19 20:14	4.1K
	meme.dat	2003-10-14 13:08	22K
	mpath.ontology.test	2003-10-22 20:52	4.5K
	multi_1.fa	2001-04-30 10:12	925
	multi_2.fa	2001-04-30 10:12	925
	multi_blast.bls	2001-09-05 20:09	108K
	multifa.seq	2001-04-30 10:12	721
	multifa.seq.qual	2004-05-13 22:46	1.7K
	multiline-intrablock-comment.nex	2004-10-26 21:47	628
	multiseq.bls	2001-06-16 16:42	14K
	mus.bls.xml	2003-10-29 20:55	27K
	mutations.dat	2001-10-09 10:11	13K
	mutations.old.dat	2004-07-10 11:58	13K
	mutations.old.xml	2004-07-10 11:28	17K
	mutations.xml	2004-07-10 11:28	17K
	myco_sites.gff	2002-05-20 16:02	45K
	nei_gojobori_test.aln	2003-07-24 07:11	544
	neighbor.dist	2002-03-24 07:35	133
	no-genes.genscan	2001-12-06 10:25	487
	no_hsps.blastp	2003-11-04 14:25	35K
	noninterleaved.phy	2004-11-01 14:10	1.6K
	omim_genemap_test	2002-09-16 20:41	16K
	omim_text_test	2002-09-16 20:41	3.6K
	pdb1bpt.ent	2001-11-28 05:37	48K
	pep-266.aln	2003-12-27 09:58	8.4K
	phi.out	2001-04-30 10:12	14K
	phipsi.out	2001-04-30 10:12	184K
	phredfile.phd	2001-09-27 17:16	8.4K
	phylipdist-36.out	2003-02-04 08:41	13K
	phylipdist.out	2002-12-13 11:30	307
	pictogram.fa	2003-05-09 23:50	252
	plague_yeast.bls.xml	2001-10-22 22:41	19K
	polymorphism.dat	2001-08-03 06:18	2.6K
	polymorphism.old.xml	2004-07-10 11:28	3.4K
	polymorphism.xml	2004-07-10 11:28	3.4K
	popgen_saureus.dat	2003-02-12 13:01	616
	popgen_saureus.multidat	2003-02-26 08:56	1.3K
	popstats.prettybase	2003-07-27 17:08	308
	primedseq.fa	2003-07-11 10:19	224
	primer3_infile.txt	2002-08-06 12:37	2.4K
	primer3_outfile.txt	2002-08-06 12:37	4.8K
	primer3_output.txt	2003-07-11 10:19	11K
	promoterwise.out	2003-03-10 11:21	786
	protpars.phy	2002-03-21 08:38	21K
	psi_xml.dat	2004-07-15 04:25	4.2K
	psiblastreport.out	2001-04-30 10:12	347K
	qrna-relloc.out	2003-07-25 11:21	3.0K
	qualfile.qual	2002-06-04 17:08	15K
	quoted-strings1.nex	2004-10-26 21:47	494
	quoted-strings2.nex	2004-10-26 21:47	494
	radical-whitespace.nex	2004-10-26 21:47	891
	radical-whitespace_02.nex	2004-10-26 21:47	915
	rebase.itype2	2003-07-11 09:18	1.0K
	rebase.withrefm	2004-11-10 09:01	10K
	registry/	2005-11-10 15:10	-
	repeatmasker.fa.out	2002-09-09 21:26	419
	revcomp_mrna.gb	2002-08-30 16:31	92K
	roa1.dat	2001-04-30 10:12	23K
	roa1.genbank	2001-04-30 10:12	2.5K
	roa1.swiss	2001-04-30 10:12	7.0K
	sbay_c545-yeast.BLASTZ.PSL	2003-08-09 16:48	12K
	seqdatabase.ini	2003-11-20 20:03	300
	seqfile.pir	2001-04-30 10:12	1.1K
	seqs.fas	2001-04-30 10:12	925
	sequencefamily.dat	2002-10-17 22:00	38K
	short.blx	2001-06-14 08:15	16K
	sim4.for.for	2001-04-30 10:12	378
	sim4.for.rev	2001-04-30 10:12	207
	sim4.rev	2001-04-30 10:12	438
	sofa.ontology	2003-03-06 14:00	4.0K
	sparsealn.needle	2002-03-14 09:58	1.6K
	stress_test_medline.xml	2002-03-07 02:14	37K
	stress_test_pubmed.xml	2002-03-08 02:11	15K
	swiss.dat	2002-10-06 20:55	38K
	swisspfam.data	2001-04-30 10:12	1.1K
	tab1part.mif	2004-07-14 06:52	6.8K
	tab2part.mif	2004-07-14 06:50	237
	tab3part.mif	2004-07-14 06:50	1.6K
	test.ace	2001-04-30 10:12	1.1K
	test.embl	2001-04-30 10:12	13K
	test.fasta	2003-03-10 01:34	822
	test.game	2003-12-16 09:58	45K
	test.gcg	2003-04-17 07:39	611
	test.gcgblast	2002-08-08 22:58	3.8K
	test.gcgfasta	2003-08-25 12:35	11K
	test.genbank	2002-10-01 20:04	16K
	test.genbank.noseq	2003-02-11 15:39	10K
	test.interpro	2004-08-23 21:11	11K
	test.mase	2001-04-30 10:12	14K
	test.meme	2004-10-16 09:46	22K
	test.meme2	2004-11-01 14:10	19K
	test.metafasta	2003-04-06 23:35	229
	test.nh	2002-07-17 10:09	107
	test.nhx	2002-07-17 10:09	408
	test.pfam	2001-04-30 10:12	4.2K
	test.pir	2003-04-17 07:42	808
	test.raw	2001-04-30 10:12	520
	test.swiss	2003-11-28 02:55	2.8K
	test.tab	2003-04-17 07:43	742
	test.txt	2001-04-30 10:12	573
	test.waba	2002-07-14 18:41	53K
	test_badlf.gcg	2004-11-01 14:10	381
	testaln.aln	2003-09-09 07:17	4.3K
	testaln.fasta	2003-07-19 17:35	4.6K
	testaln.mase	2001-04-30 10:12	1.0K
	testaln.metafasta	2003-04-06 23:35	151
	testaln.msf	2001-05-25 07:34	7.2K
	testaln.nexus	2001-06-14 07:45	577
	testaln.pfam	2001-05-25 07:34	4.1K
	testaln.phylip	2001-06-14 07:45	269
	testaln.po	2004-05-15 15:33	13K
	testaln.prodom	2004-11-01 14:10	4.6K
	testaln.selex	2001-04-30 10:12	4.5K
	testaln.stockholm	2003-03-14 02:38	20K
	testdat.exonerate	2002-12-18 12:21	3.2K
	testdbaccnums.out	2002-11-11 06:57	14K
	testfuzzy.genbank	2002-08-12 03:40	3.4K
	transfac.dat	2003-10-14 13:08	2.4K
	unigene.data	2004-07-14 00:11	4.6K
	urease.tre.nexus	2004-06-24 10:11	1.1K
	version2.scf	2001-04-30 10:12	123K
	version3.scf	2001-04-30 10:12	123K
	worm_fam_2785.cdna	2003-01-10 08:35	4.3K
	yeast.tRNAscanSE	2004-05-13 10:09	14K
	yn00.mlc	2002-11-10 11:36	5.9K