Hung Huy Huynh
LeThuy Tran

Math 6790 - Case Studies Spring 2005
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Kratos is a tool to find the longest matching DNA sequence between 2 genomnes.
It compares both the forward and reverse strands.

Input files are FASTA files that could be found at http://www.ncbi.nlm.nih.gov/
There are some input files in "data" folder.

The source code is compiled with Visual Studio 2003, found in folder "Kratos"

The GUI is built with JBuilder, JDK 1.4.2

To run with GUI:

1. Double click on kratos.jar to run on Windows
2. To run on command line: java -jar kratos.jar


To run on command line:

Kratos.exe file1 file2
