AAD AAS ACC ACG AEAa AEAb AEN AI AMmA AOG APX APXhard ARN ARTMAP ASM ATS Abhijit Abul Acknowledgement Admanit Adrian Adrien Aeling Agarwal Agius Ajit Akshay Alain Alber Alekseyev Alexandr Alexei Alhajj AlignACE Allali Aluru Aman Ana Anagnostopoulos Anastassiou Andreas Andreoli Andrzej Anneke Anshul Anupam Apostolos Arlindo Ashwin Astola Au Augusto Avants Avital Axenopoulos Ayala Ayumi Azuaje B BAB BBD BCGS BL BLASTN BLASTP BLS BLSTM BMG BMS BNPP BRNN BRTSS BSI BSM Baca Backpropagation Bafna Baldi Balla Bannai Bansal Bao Baolin Barak Barash Barzuza Basecalling Beckmann Beebe Benini Berard Bereg Bergeron Bernhard Bernt BibNet BibTeX Biclustering Biclusters Biing Bilu Binh Bio Bioconductor Biogeography Bioinformatics Biomolecular Biopolymer Biyani Bj Bjarni Blazewicz Blelloch Blin Blisard Boaz Bocker Boden Bogani Bogdan Bonizzoni Bontempi Bordewich Boscolo Brachmann Breitling Brinza Britta Bruijn Bulent Burke C CAC CAE CBA CBG CBR CCN CCR CCS CFN CGD CGM CHN CISA CNS CODEN CPD CPP CPS CRC CRP CSC CSG CSI CST CTR CXCR Cai Caldwell Cameron Campbell Cannane Cannarozzi Carlo Carrer Carvalho Casadio Cascella Casimir Cedric Cesar Cesare Chai Chalco Chan Chaolin Chaturvedi Chaudhari Chauve Chawla Cheng Chengbang Cheryl Chiang Chiara Chieh Chih Chihchau Chinh Chong Christina Christophe Chromosomes Chu Chunfang Chung Chunmei Cickovski Cigdem Ciliax Ciocchetta Ciona Civera Co Codon Coexpression Colin Condorcet Congdon Coreceptor Corrado Corrales Corynebacterium Costa CpG CreI Cristina Crochemore Cruz Cryo Csuros Cui Cytogenetic D DCB DDE DDK DEM DGN DMH DMP DMR DMT DOI DPA DRB DSD DTS Daming Danziger Daras Dario Dasigi Davila Dawy De Degui Della Demir Denis Derek Deschenes Dezulian Dhamdhere Diaz Diekmann Dimitrios Dimitris Dingledine Diploid Dondi Dong Dror Duhong Dumitru E EAA EAI ECIST EDH EDN EDS EGS EIC ELC ELCS EM EMG EMatch EST EUR Edmond Elchanan Eleazar Elena Elias Eng Eran Erchin Erkan Eskin Eukaryotic Eulenstein Exocytosis Eyke F FAO FAX FCG FCM FMG FPA FRP FTD Farahnaz Faruck Faruk FastR Federica Feng Fernandes Fernandez Ferrante Fertin Fogel Freitas Fri Fu Fujarewicz Furlanello G GAMI GAMI's GBO GBPTT GCM GEI GEIa GEIb GEW GFN GMM GMR GNA GRB Gabor Ganapathy Ganeshkumar Gao Gapped Gasbarra Gascuel Gaskins GeRNAMo GenBank Genome Genomes Genomic Genomics Geok Georgios Gerardo Gerassimos Gergely Gesine Ghahramani Gianluca Giegerich Gina Girolami Giuseppe Glasmachers Glazier Glimm GoStats Goebel Goeffon Gonnet Goodson Goutsias Gramm Gridding GroEL Grossi Guang Guillaume Guillermo Gultekin Guohui Gupta Guruceaga Gusev Gusfield Gustafsson H HB HCA HCR HDA HIV HMM HSG HSP HTL Haas Hagenauer Hai Haim Haixu Haiying Halldorsson Halperin Handl Hannenhalli Hannu Hao HapMap Haplotype Haplotyping Harel Hasan Hautaniemi Hawrylycz Haynor Heber Hecht Heikki Hein Helaine Hendriks Hentschel Hershkovitz Hidde Hideo Hiroshi Hiroto Hitoshi Hoang Hochsmann Hodgkin's Hofacker Homologues Hongyu Hornquist Hsiang Hsieh Hsien Hu Huai Huang Hubbard Hui Huidong Huilin Huiru Hullermeier HumanGenome Humayun Huson Hybridization Hyun Hyyro IAR ICG IEDM IGA IGR IHF IIA INA IPA IPC ISH ISL ISO ISSN ITCBCY ITE ITP Ian Iba Iersel Igel Ignacio Ilya Imbalanced Inge InterPlay Internet Ioan Istrail Itsik Ivo Ivry Izaguirre J JCP JMB Jaakko Jacek Jagath Jaime Jakob Janardan Janne Jansen Jari Jasmin Jens Jia Jiang Jianlin Jie Jieping JigCell Jin Jinbo Jing Jingfen Jinjin Jinmiao Joachim Jonassen Jong Josepha Jotun Jue Juha Julien Jun Junfeng Jung Junhyong Jurman K KDEM KNN KOG Kadirkamanathan Kanaan Kao Kaski Kasprzak Kedar Keedwell Keich Keijsper Kelk Kell Kemeny Kenta Keong Keren Kimberly Kimmel Klebe Klopper Knuuttila Kok Kolodny Korodi Koushnir Kovalev Kovalyov Kreiswirth Kresimir Kristen Kristin Krzanowski Krzysztof Kuan Kucherov Kuhn Kulikowski Kundaje Kuo L LCB LLE LPD LSC LSCs LTP LaTeX Labarre Lacroix Lahti Lamers Lancia Lasker Lau Laurent Layne Le Leen Legionella Lei Lein Leong Lerner Letinic Leung Lev Li Liang Liao Lin Linder Linder's Ling Lipniacki Lipo Liu Loi Lombardi Lonardi Lones Loren Louxin Lu Luay Luca Luis Luo Lusheng Lymphomas Lyngso M MCC MCMC MCU MDT MED MEME MFE MFS MGA MGWT MLF MLP MLST MPA MPPH MQC MSE MSG MSS MSSC MST MWC Mabrouk Madeira Magnus Makinen Malmberg Mamitsuka Mandoiu Manuel Marc Marco Marek Maribel Markup Marta Masayuki Mato Matsen Matthias Matti Mattingly MaxConf Maxime Meenakshi Meinicke Meitinger Mena Merkle Merler Mersch Methylation Michal Michel Micheli Microarray Middendorf Mihail Mika Mikael Mikhail Miklos Mitra Miyano Mon Moncho Monte Morcos Moret Morphogenesis Moshe Mossel Moulton Muchnik Mueller Multicategory Multiclass Multidrug Multimeme Multiobjective Multipartite Multiseed Mumcuo N NAC NBP NBT NDH NF NGW NHL NMR NNI NP NRE NRS Nadia Nagarajan Naidich Nakai Nakhleh Narayanan Nardini Naren Narendra Nasimul Nava Navathe Neri Neuroinformatics Ng Nguyen Nico Nicolas Nikkila Nils Noe Noman Noncoding Nov Nussinov O OAI OCM OED OMS OVO OVerlap Ogul Oligo Oliveira Olivier Ollikainen Omer Ong Oranit Ortholog Orthologous Osman Ozy P PAE PCM PCR PDB PDF PDZ PIB PLDE PMF PMR PMS PMSprune PNB PNM PPP PRX PSN PSO PSR PSS PSSM PTN PWM Padolina Pande Pankaj Paola Pathak Pavel Pe'er Pedigrees Peng Petros Petteri Pevzner Pfeifer Phaedra Phillip Phylogenetic Pirinen Pisanti Plasmodium Podhorski Podtelezhnikov PoissonHC PoissonS Polat Pollastri's Polymorphism Ponzoni Popescu PositionSpecific Possibilistic PpoI Pravesh Preclustering PredLOC Preparata Priami Proteomics Pseudoknots PubMEd Q QBP Qi Qian Qiang Qing Quaglia Quek R RAC REA RFE RL RM RMD RNA RNN RRN Radhakrishnan Raffaella Rahmatpanah Rainer Rajapakse Rajasekaran Rajiv Ramachandran Ramakrishnan Ramaswamy's Randal Rao Ravi Recalibration Reconstructibility Reczko Reda Reinert Riccardo Rita Rizzi RnaPredict Roch Roded Rong Roos Rother Roychowdhury Roytberg Rubio Rueda Rui Runsheng Runxuan S SANN SAR SBML SCP SDM SDS SGN SGR SHR SJ SLM SLP SMR SNP SNPs SNPsaccount SOV SPD SPDP SPM SPP SPR SPSP SPXGA SRF SRP SS SSS STA SVM SVMs SWISSPROT Sabatti Saccharomices Saccharomyces Sadot Sagi Sagot Saigo Salemi Sammeth Sampsa Sanguthevar Sanjay Sanjit Sankoff Sapiro Saratchandran Sarawan Satish Satoru Sayan Scheid Schliep Schnable Schonhuth Sebastien Segura Semisupervised Semple Senear Sep Serafini Sergey Serpedin Severine Sevilla Sevon Shaffer Shahar Shamir Shamkant Shannon Shaojie Sharan Shatsky Shen Shi Shinn Shinohara Simin Sinha Sinkkonen Sipper Sjahputera Snir Sodt Solovay's Sorin Spa Spang Spatio Spillner Spreadsheet Sridhar Srinath Srinivas Stadler Stefan Stefanie Stefano Steffen Steinhoff Stephane Stougie Stoye Strintzis Subcellular Sudha Sundararajan Sungroh Supertrees Susanna Swamidass Swierniak Sy SynPAM T TBR TCBB TDS TMB TRL TSA TSP TTP TVB Tabus Takeda Tamar Tandy Tannenbaum Tannier Tel Thach Thireou Tholse Thu Tian Tien Tilmann Timme Tobias Toivanen Toivonen Tomasz Toomre Tor Transcriptional Translocation TreeDT Trevor Trias Tseng Tuan Tue Tyrrell Tzovaras Tzvika U UDT ULDA UMC UNC UPM URL UT UUD Unicyclic Unidentifiable Unsupervised Upreti Uri V VCD Varghese Vashist Vass Vedova Veli Venu Vesa Vialette Vidya Vidyadharan Vijay Vijaya Vikas Vineet Vinh Visakan Viterbi Voss Vwani W WABI WM WWW Wai Warnow Wavelet Wei Weichuan Wen Wentao Wenyuan Wernicke Weskamp Wiese Witwer Wojtek Wolbachia Wolfson Wong Wongsa Wu Wuchty Wunsch X XOR Xian Xiang Xiaodong Xiaohua Xiaolin Xiaowen Xiaoye Xie Xin Xiong Xiuzhen Xu Xue Xuegong Xuesong Ya Yan Yanxiong Ye Yener Yeshaya Yew Yi Yijuan Ying Yinglei Yishai Yoan Yonatan Yong Yongjing Yoon Yossi Yu Yuanyi Yuchun Yufeng Yun Yushkevich Z Zaher Zana Zarpalas Zea Zelikovsky Zeng Zhang Zhao Zhen Zheng Zhi Zhong Zhu Ziv Zong Zoubin abbrev ack acknowledgement acm actives al alla aniuc antiretroviral approximability apr aureus autosomal basecaller basecallers basecalling beNP beebe bibdate bibmods bibnames bibsort bibsource bicluster biodiversity bioengineering bioinformatics biomolecular biotechnology blstm bytepacked byvolume c cDNA cerevisiae cfm chemokine ching chromosomal chromosome chromosomes chsmann co codetable codon coexpressed coexpression colocalized conflated connectivities cryo cs cse curated cytogenetic cytoplasmic d dS dataset datasets de deJong diploid dis discretization discretize dl dna docstring doi dx e edu electropherogram electropherograms elegans eletropherogram em email encoders endonucleases engr ent eukaryote eukaryotic falciparum feedforward ferritin fsa g gametes gapped genome genomes genomic genomics genotyping glioma glutamicum gonad gr gsu haplotype haplotypes haplotyping homologues htm html http hybridization hyperellipsoidal hypermethylation hypomethylation i iTEA idx imbalanced infering inprint intersite intestinalis intra intracellular j jan jul k kB l localizations ltx lu lymphomas lysine m mRNA memetic metaheuristics methylation mfold microRNA microarray microarrays mitochondrial multicategory multiclass multidrug multilayer multiobjective multipartite n nd ndoiu neuro neuroinformatics neuroscience nhfb nonbinders noncoding o oct ois oligo optimised org ortholog orthologous outliers overfitting p paralogy pathobiology pedigrees pentose perceptron phylogenetic phylogenetics phylogenies physicochemical pneumophila polymorphism ppi pre preclustering prescreen proteasome proteome rard recalibrating recalibration regraft resampling revertible rn s scalability semisupervised serine showtags sn spa ssEAM statechart statecharts stepc subcellular sy synteny talip taxa tcbb tex transcriptional translocation twocolumn u uconn ultrametric unsupervised utah vanIersel wavelet wc wei www x xor